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  • Negative cofitness for GFF2012 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Probable transmembrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6284 Cytochrome b561 -0.56
    2 GFF5851 TPR repeat -0.54
    3 GFF7225 hypothetical protein -0.53
    4 GFF3059 Transcriptional regulator, LysR family -0.52
    5 GFF6545 Uncharacterized MFS-type transporter -0.51
    6 GFF2558 DNA protection during starvation protein -0.49
    7 GFF6060 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.49
    8 GFF2985 BUG/TctC family periplasmic protein -0.49
    9 GFF5654 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) -0.48
    10 GFF4787 ADP-ribosylglycohydrolase family protein -0.48
    11 GFF1325 no description -0.47
    12 GFF6391 RfbJ protein -0.47
    13 GFF5501 Glyoxalase family protein -0.47
    14 GFF2127 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly -0.46
    15 GFF4130 Amidase family protein SACE_5032 -0.45
    16 GFF3920 FIG00467295: hypothetical protein -0.45
    17 GFF5546 Lactam utilization protein LamB -0.45
    18 GFF1444 PRC-barrel -0.45
    19 GFF4863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.45
    20 GFF7200 Alkanesulfonates transport system permease protein -0.45

    Or look for positive cofitness