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  • Negative cofitness for GFF1995 from Sphingobium sp. HT1-2

    sigma-54 dependent DNA-binding response regulator
    SEED: Sigma-54 dependent DNA-binding response regulator

    Computing cofitness values with 16 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2723 Two-component transcriptional response regulator, OmpR family -0.86
    2 GFF1985 Transcriptional regulator, ArsR family -0.85
    3 GFF4626 RND efflux system, membrane fusion protein -0.83
    4 GFF3251 probable membrane protein STY4873 -0.76
    5 GFF2369 hypothetical protein -0.76
    6 GFF5162 RNA polymerase, sigma-24 subunit, ECF subfamily -0.75
    7 GFF4926 hypothetical protein -0.75
    8 GFF4608 hypothetical protein -0.75
    9 GFF2268 Transcriptional regulator, MarR family -0.74
    10 GFF3007 hypothetical protein -0.74
    11 GFF1812 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) -0.73
    12 GFF1503 FIG070318: hypothetical protein -0.73
    13 GFF4397 hypothetical protein -0.73
    14 GFF1790 Gene Transfer Agent terminase protein -0.72
    15 GFF3965 hypothetical protein -0.70
    16 GFF412 Bis-ABC ATPase YheS -0.70
    17 GFF3338 DNA protection during starvation protein -0.70
    18 GFF3994 hypothetical protein -0.70
    19 GFF1838 Aldo/keto reductase, SMc04056 family -0.70
    20 GFF2259 '5'-nucleotidase SurE (EC 3.1.3.5)' transl_table=11 -0.69

    Or look for positive cofitness