Negative cofitness for GFF1987 from Variovorax sp. SCN45

Pseudouridine synthase (EC 4.2.1.70), PA2043 type
SEED: Similar to ribosomal large subunit pseudouridine synthase A

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	GFF2817		Probable proline-rich protein	-0.49
2	GFF2738		hypothetical protein	-0.48
3	GFF567		KEGG: type IV fimbrial biogenesis protein FimT	-0.47
4	GFF6615		putative plasmid stabilization protein	-0.47
5	GFF2335		Lactoylglutathione lyase and related lyases	-0.46
6	GFF4185		RNA polymerase ECF-type sigma factor	-0.45
7	GFF429		RND efflux system, inner membrane transporter	-0.44
8	GFF2940		Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)	-0.42
9	GFF5765		Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)	-0.41
10	GFF5457		L-threonate dehydrogenase (NAD+)	-0.41
11	GFF2440		KEGG: RNA polymerase sigma-70 factor, ECF subfamily	-0.41
12	GFF234		Protein QmcA (possibly involved in integral membrane quality control)	-0.41
13	GFF5834		Oxidoreductase, GMC family	-0.41
14	GFF1838		Manganese transport protein MntH	-0.39
15	GFF4726		hypothetical protein	-0.39
16	GFF4421		Conjugative transfer protein TrbF	-0.39
17	GFF4152		ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)	-0.39
18	GFF4766		identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676	-0.39
19	GFF622		BUG/TctC family periplasmic protein	-0.39
20	GFF3214		FIG138928: iron-regulated membrane protein	-0.38

Or look for positive cofitness