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  • Negative cofitness for GFF1986 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6772 L-arabonate dehydratase (EC 4.2.1.25) -0.66
    2 GFF5094 BUG/TctC family periplasmic protein -0.64
    3 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) -0.61
    4 GFF1577 hypothetical protein -0.60
    5 GFF2117 KEGG: type IV fimbrial biogenesis protein FimT -0.60
    6 GFF5373 Xylose isomerase-like TIM-barrel protein KPN_00539 -0.59
    7 GFF6825 CaiB/BaiF family protein -0.59
    8 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) -0.58
    9 GFF4064 no description -0.56
    10 GFF7084 Mobile element protein -0.56
    11 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) -0.56
    12 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) -0.55
    13 GFF769 Conserved TM helix -0.54
    14 GFF4515 no description -0.53
    15 GFF3245 hypothetical protein -0.53
    16 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) -0.53
    17 GFF3975 Metal-dependent hydrolase -0.53
    18 GFF6951 Alcohol dehydrogenase (EC 1.1.1.1) -0.52
    19 GFF2149 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) -0.52
    20 GFF5617 Coenzyme A ligase -0.52

    Or look for positive cofitness