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  • Negative cofitness for GFF1981 from Sphingobium sp. HT1-2

    Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
    SEED: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
    KEGG: pilus assembly protein CpaE

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3035 hypothetical protein -0.78
    2 GFF5212 Acetate kinase (EC 2.7.2.1) -0.77
    3 GFF523 hypothetical protein -0.77
    4 GFF642 hypothetical protein -0.76
    5 GFF2334 Transcriptional regulator, HxlR family -0.75
    6 GFF1098 Type IV secretory pathway, VirD2 components (relaxase) -0.74
    7 GFF310 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.73
    8 GFF1241 Transcriptional regulator, AraC family -0.73
    9 GFF1246 FIG00854991: hypothetical protein -0.72
    10 GFF1784 hypothetical protein -0.72
    11 GFF5252 Prevent host death protein, Phd antitoxin -0.71
    12 GFF1027 beta-galactosidase (EC 3.2.1.23) -0.70
    13 GFF2590 Uncharacterized protein GguC -0.70
    14 GFF3977 hypothetical protein -0.70
    15 GFF4811 hypothetical protein -0.70
    16 GFF1932 Alpha-1,2-mannosidase -0.69
    17 GFF1038 Gll4423 protein -0.69
    18 GFF908 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) -0.69
    19 GFF1801 hypothetical protein -0.69
    20 GFF1280 Bll3966 protein -0.69

    Or look for positive cofitness