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  • Negative cofitness for PS417_00990 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_07120 RNA polymerase sigma-H factor -0.24
    2 PS417_17840 betaine-aldehyde dehydrogenase -0.18
    3 PS417_02520 chemotaxis protein -0.17
    4 PS417_18840 chemotaxis protein -0.17
    5 PS417_24820 ethanolamine ammonia-lyase -0.16
    6 PS417_27975 type VI secretion protein -0.16
    7 PS417_10540 NAD-dependent deacetylase -0.16
    8 PS417_09465 FMN reductase -0.16
    9 PS417_19475 pseudouridine synthase -0.16
    10 PS417_14945 beta-lactamase -0.16
    11 PS417_21235 transglutaminase -0.16
    12 PS417_12025 DSBA oxidoreductase -0.15
    13 PS417_17040 hypothetical protein -0.15
    14 PS417_02440 flagellar motor protein MotB -0.15
    15 PS417_28055 peptidase -0.15
    16 PS417_16645 XRE family transcriptional regulator -0.15
    17 PS417_00635 sulfonate ABC transporter ATP-binding protein -0.15
    18 PS417_13985 dehydrogenase -0.15
    19 PS417_08590 hypothetical protein -0.15
    20 PS417_10415 hypothetical protein -0.15

    Or look for positive cofitness