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  • Negative cofitness for GFF1930 from Variovorax sp. SCN45

    RTX toxin transporter, ATP-binding protein
    SEED: cyclolysin secretion ATP-binding protein
    KEGG: ATP-binding cassette, subfamily B, bacterial HlyB/CyaB

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7248 no description -0.59
    2 GFF5751 Flagellar hook-basal body complex protein FliE -0.55
    3 GFF4816 FIG01074109: hypothetical protein -0.54
    4 GFF3664 Transcriptional regulator, AraC family -0.53
    5 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG -0.52
    6 GFF4856 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) -0.51
    7 GFF7029 hypothetical protein -0.50
    8 GFF4033 no description -0.50
    9 GFF5005 cytidine/deoxycytidylate deaminase family protein -0.50
    10 GFF3393 Benzoate ABC transporter, ATP-binding protein 2 -0.49
    11 GFF5270 BUG/TctC family periplasmic protein -0.49
    12 GFF1357 no description -0.48
    13 GFF3029 T6SS component TssM (IcmF/VasK) -0.48
    14 GFF2560 FIG00932643: hypothetical protein -0.48
    15 GFF7292 ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog -0.48
    16 GFF1304 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) -0.47
    17 GFF3396 Benzoate ABC transporter, permease protein 1 -0.47
    18 GFF6860 Epoxide hydrolase (EC 3.3.2.9) -0.47
    19 GFF7264 Gluconolactonase (EC 3.1.1.17) -0.46
    20 GFF6742 NAD(P)H-flavin oxidoreductase -0.46

    Or look for positive cofitness