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  • Negative cofitness for GFF193 from Variovorax sp. SCN45

    Two-component sensor PilS
    SEED: Two-component sensor PilS

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2431 RNA polymerase ECF-type sigma factor -0.57
    2 GFF3566 Transcriptional regulator, LysR family -0.53
    3 GFF2671 Domain of unknown function / Efflux ABC transporter, permease protein -0.53
    4 GFF2791 hypothetical protein -0.52
    5 GFF6722 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) -0.50
    6 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) -0.49
    7 GFF4521 Guanine deaminase (EC 3.5.4.3) -0.49
    8 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR -0.49
    9 GFF2010 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) -0.48
    10 GFF6821 ribonuclease H -0.48
    11 GFF1400 putative 2-pyrone-4,6-dicarboxylic acid hydrolase -0.48
    12 GFF5924 FOG: HEAT repeat -0.48
    13 GFF2436 no description -0.47
    14 GFF6565 hypothetical protein -0.47
    15 GFF5847 putative membrane protein -0.46
    16 GFF3482 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.46
    17 GFF3195 hypothetical protein -0.46
    18 GFF2880 Multidrug resistance transporter, Bcr/CflA family -0.45
    19 GFF2081 no description -0.45
    20 GFF6247 ApaG protein -0.45

    Or look for positive cofitness