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  • Negative cofitness for GFF193 from Sphingobium sp. HT1-2

    Conjugative transfer protein TrbL
    SEED: Conjugative transfer protein TrbL
    KEGG: type IV secretion system protein TrbL

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4624 Efflux transport system, outer membrane factor (OMF) lipoprotein -0.86
    2 GFF1468 hypothetical protein -0.80
    3 GFF3682 hypothetical protein -0.78
    4 GFF510 hypothetical protein -0.77
    5 GFF5115 Mobile element protein -0.75
    6 GFF1617 hypothetical protein -0.74
    7 GFF3947 hypothetical protein -0.73
    8 GFF4884 3-hydroxyacyl-CoA dehydrogenase -0.73
    9 GFF1723 hypothetical protein -0.72
    10 GFF1822 Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway -0.72
    11 GFF4277 Na(+) H(+) antiporter subunit G -0.72
    12 GFF773 dioxygenase, TauD/TfdA family -0.71
    13 GFF4900 hypothetical protein -0.71
    14 GFF4802 Type IV secretion system protein VirD4 -0.70
    15 GFF865 Pass1-related protein -0.68
    16 GFF2849 hypothetical protein -0.68
    17 GFF4514 hypothetical protein -0.68
    18 GFF4382 hypothetical protein -0.68
    19 GFF2600 Uncharacterized aldehyde oxidase, molybdopterin-binding subunit -0.67
    20 GFF3323 Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) -0.67

    Or look for positive cofitness