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  • Negative cofitness for GFF1908 from Variovorax sp. SCN45

    Short-chain dehydrogenases of various substrate specificities
    SEED: Short-chain dehydrogenases of various substrate specificities

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6917 Uncharacterized MFS-type transporter -0.50
    2 GFF5749 Flagellar motor switch protein FliG -0.47
    3 GFF3400 Benzaldehyde dehydrogenase -0.46
    4 GFF2885 Transcriptional regulator, LysR family -0.45
    5 GFF2630 Ligand-binding SRPBCC domain protein family -0.45
    6 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.44
    7 GFF6474 hypothetical protein -0.44
    8 GFF6647 Two-component transcriptional response regulator, LuxR family -0.43
    9 GFF6364 VgrG protein -0.43
    10 GFF1821 D-glycerate 2-kinase (EC 2.7.1.165) -0.43
    11 GFF1573 Oxidoreductase, short-chain dehydrogenase/reductase family -0.42
    12 GFF4067 FIG00897050: hypothetical protein -0.42
    13 GFF920 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily -0.42
    14 GFF5938 T6SS component TssF (ImpG/VasA) -0.42
    15 GFF4491 no description -0.42
    16 GFF1252 Alkanesulfonate ABC transporter permease protein SsuC -0.41
    17 GFF2606 Tripartite tricarboxylate transporter TctC family -0.41
    18 GFF6111 Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) -0.41
    19 GFF4008 Transcriptional regulator, LysR family -0.41
    20 GFF4644 no description -0.41

    Or look for positive cofitness