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  • Negative cofitness for GFF1903 from Variovorax sp. SCN45

    Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
    SEED: Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7390 Aldehyde dehydrogenase (EC 1.2.1.3) -0.66
    2 GFF1542 Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3) -0.62
    3 GFF6834 no description -0.62
    4 GFF1090 Phosphohistidine phosphatase SixA -0.59
    5 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) -0.58
    6 GFF7321 Sensor histidine kinase GlrK -0.57
    7 GFF4313 2-dehydropantoate 2-reductase (EC 1.1.1.169) -0.57
    8 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) -0.56
    9 GFF1745 Acyl-CoA dehydrogenase -0.56
    10 GFF2109 FIG00454067: hypothetical protein -0.55
    11 GFF3565 Acyl-CoA dehydrogenase -0.55
    12 GFF4208 BUG/TctC family periplasmic protein -0.55
    13 GFF2357 DNA repair protein RecN -0.54
    14 GFF1951 no description -0.54
    15 GFF6444 no description -0.54
    16 GFF203 hypothetical protein -0.53
    17 GFF1842 Transcriptional regulator, LysR family -0.53
    18 GFF5541 Transcriptional regulator, GntR family -0.53
    19 GFF2797 Molybdopterin synthase sulfur carrier subunit -0.52
    20 GFF6828 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) -0.51

    Or look for positive cofitness