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  • Negative cofitness for PS417_09670 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_27485 hypothetical protein -0.22
    2 PS417_10920 LysR family transcriptional regulator -0.21
    3 PS417_22575 exonuclease I -0.21
    4 PS417_04170 stringent starvation protein A -0.20
    5 PS417_04435 uracil phosphoribosyltransferase -0.19
    6 PS417_04430 uracil transporter -0.19
    7 PS417_11885 Inositol transport system sugar-binding protein (from data) -0.19
    8 PS417_16885 hypothetical protein -0.19
    9 PS417_06190 sodium:proton antiporter -0.18
    10 PS417_16195 AraC family transcriptional regulator -0.18
    11 PS417_21425 4-amino-4-deoxychorismate lyase -0.17
    12 PS417_04920 GntR family transcriptional regulator -0.17
    13 PS417_26370 RNA helicase -0.17
    14 PS417_24495 NAD(FAD)-utilizing dehydrogenase -0.17
    15 PS417_17310 allantoate amidohydrolase -0.17
    16 PS417_10095 hypothetical protein -0.17
    17 PS417_09190 cysteine protease -0.16
    18 PS417_09690 sugar dehydrogenase -0.16
    19 PS417_02975 3-dehydroquinate dehydratase -0.16
    20 PS417_09025 alpha/beta hydrolase -0.16

    Or look for positive cofitness