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  • Negative cofitness for GFF1897 from Variovorax sp. SCN45

    Two-component system sensor histidine kinase/response regulator hybrid
    SEED: C4-dicarboxylate transport sensor protein dctS (EC 2.7.3.-)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) -0.60
    2 GFF4632 Glycosyl transferase, family 2 -0.60
    3 GFF2855 Putative hydrolase or acyltransferase -0.60
    4 GFF4637 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-) -0.59
    5 GFF665 hypothetical protein -0.56
    6 GFF5546 Lactam utilization protein LamB -0.55
    7 GFF5471 Creatinine amidohydrolase (EC 3.5.2.10) -0.55
    8 GFF4469 Cell division protein FtsA -0.55
    9 GFF4638 CDP-glucose 4,6-dehydratase (EC 4.2.1.45) -0.55
    10 GFF6085 Transcriptional regulator, AcrR family -0.54
    11 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD -0.54
    12 GFF4227 Thiamine pyrophosphate-requiring enzymes -0.54
    13 GFF4636 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) -0.54
    14 GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family -0.54
    15 GFF4639 Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33) -0.53
    16 GFF2935 FIG004684: SpoVR-like protein -0.53
    17 GFF6990 hypothetical protein -0.52
    18 GFF1346 hypothetical protein -0.52
    19 GFF414 Malate dehydrogenase (EC 1.1.1.37) -0.52
    20 GFF424 Cobalamin synthase (EC 2.7.8.26) -0.52

    Or look for positive cofitness