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  • Negative cofitness for GFF1893 from Variovorax sp. SCN45

    FIG00466861: hypothetical protein
    SEED: FIG00466861: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3381 Broad-specificity amino acid ABC transporter, substrate-binding protein -0.50
    2 GFF3935 RNA polymerase ECF-type sigma factor -0.50
    3 GFF4461 hypothetical protein -0.49
    4 GFF564 hypothetical protein -0.49
    5 GFF5498 Uncharacterized protein SPO0681 -0.47
    6 GFF6847 Ferric siderophore transport system, periplasmic binding protein TonB -0.45
    7 GFF492 no description -0.45
    8 GFF4017 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family -0.44
    9 GFF7004 Flagellar biosynthesis protein FlhA -0.44
    10 GFF6462 Integral membrane protein -0.44
    11 GFF5705 Transcriptional regulator, AcrR family -0.44
    12 GFF4874 Plasmid replication initiator protein -0.44
    13 GFF4857 benzoate MFS transporter BenK -0.44
    14 GFF5280 Transcriptional regulator of various polyols utilization, AraC family -0.43
    15 GFF6592 hypothetical protein -0.43
    16 GFF3071 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) -0.43
    17 GFF2212 KEGG: prepilin peptidase CpaA -0.43
    18 GFF22 hypothetical protein -0.43
    19 GFF2637 no description -0.42
    20 GFF3937 Transcriptional regulator, AraC family -0.42

    Or look for positive cofitness