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  • Negative cofitness for GFF189 from Variovorax sp. SCN45

    Negative transcriptional regulator
    SEED: Negative transcriptional regulator
    KEGG: transcriptional regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3793 no description -0.62
    2 GFF5542 no description -0.59
    3 GFF7150 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) -0.59
    4 GFF5999 DNA polymerase IV (EC 2.7.7.7) -0.58
    5 GFF959 Phage holin -0.53
    6 GFF6754 no description -0.52
    7 GFF7322 hypothetical protein -0.52
    8 GFF3575 no description -0.51
    9 GFF3672 no description -0.51
    10 GFF3555 Mg-chelatase subunit ChlD -0.51
    11 GFF6705 hypothetical protein -0.49
    12 GFF5441 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein -0.49
    13 GFF6453 Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein -0.49
    14 GFF4881 HYPOTHETICAL/UNKNOWN PROTEIN -0.47
    15 GFF4935 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) -0.47
    16 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) -0.46
    17 GFF2639 Ferrichrome-iron receptor -0.46
    18 GFF6841 hypothetical protein -0.46
    19 GFF2910 BUG/TctC family periplasmic protein -0.46
    20 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component -0.46

    Or look for positive cofitness