• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF1882 from Variovorax sp. SCN45

    2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit (EC 1.2.7.-)
    SEED: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
    KEGG: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4561 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) -0.61
    2 GFF3772 Arginase (EC 3.5.3.1) -0.61
    3 GFF4812 no description -0.60
    4 GFF4800 DNA mismatch repair protein MutL -0.58
    5 GFF891 Gfa-like protein -0.57
    6 GFF1262 Rhodanese-related sulfurtransferase -0.56
    7 GFF1241 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) periplasmic (secreted in GramPositives) -0.56
    8 GFF7259 no description -0.55
    9 GFF2177 no description -0.55
    10 GFF4212 Methionine gamma-lyase (EC 4.4.1.11) -0.55
    11 GFF3544 no description -0.54
    12 GFF5961 Acetyltransferase -0.54
    13 GFF1775 no description -0.54
    14 GFF3030 Uncharacterized protein ImpA -0.54
    15 GFF2365 Altronate dehydratase (EC 4.2.1.7) -0.54
    16 GFF6848 Biopolymer transport protein ExbD/TolR -0.53
    17 GFF3120 no description -0.53
    18 GFF92 KEGG: general secretion pathway protein I -0.53
    19 GFF2997 FIG027190: Putative transmembrane protein -0.53
    20 GFF3487 InterPro IPR005806 COGs COG2146 -0.53

    Or look for positive cofitness