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  • Negative cofitness for GFF188 from Sphingobium sp. HT1-2

    Conjugative transfer protein TrbB
    SEED: Conjugative transfer protein TrbB
    KEGG: type IV secretion system protein VirB11

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1838 Aldo/keto reductase, SMc04056 family -0.72
    2 GFF4917 '3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)' transl_table=11 -0.66
    3 GFF5209 hypothetical protein -0.66
    4 GFF1979 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly -0.64
    5 GFF4753 Resolvase, N-terminal domain -0.63
    6 GFF3987 hypothetical protein -0.62
    7 GFF9 hypothetical protein -0.60
    8 GFF1513 hypothetical protein -0.60
    9 GFF1303 hypothetical protein -0.59
    10 GFF4125 ABC transporter, ATP-binding protein (cluster 9, phospholipid) -0.59
    11 GFF1767 Gene Transfer Agent NlpC/P60 family peptidase -0.58
    12 GFF335 hypothetical protein -0.58
    13 GFF128 hypothetical protein -0.58
    14 GFF1171 hypothetical protein -0.58
    15 GFF4124 ABC transporter, permease protein (cluster 9, phospholipid) -0.57
    16 GFF1268 hypothetical protein -0.57
    17 GFF736 hypothetical protein -0.56
    18 GFF4301 hypothetical protein -0.56
    19 GFF2941 hypothetical protein -0.56
    20 GFF2167 hypothetical protein -0.56

    Or look for positive cofitness