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  • Negative cofitness for GFF1868 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
    KEGG: polar amino acid transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2622 Putative transport protein -0.58
    2 GFF3564 BUG/TctC family periplasmic protein -0.56
    3 GFF4923 Substrate-specific component BioY of biotin ECF transporter -0.54
    4 GFF5661 hypothetical protein -0.51
    5 GFF2175 hypothetical protein -0.51
    6 GFF2002 Thioredoxin related protein PA2694 -0.50
    7 GFF6251 hypothetical protein -0.49
    8 GFF2776 hypothetical protein -0.49
    9 GFF6584 Pyruvate kinase (EC 2.7.1.40) -0.49
    10 GFF5135 DNA repair exonuclease family protein YhaO -0.49
    11 GFF4802 Osmotically-inducible lipoprotein OsmB -0.48
    12 GFF5277 Sorbitol dehydrogenase (EC 1.1.1.14) -0.48
    13 GFF2946 Regulator of competence-specific genes -0.47
    14 GFF3549 FIG01127675: hypothetical protein -0.46
    15 GFF5831 Ketosteroid isomerase-related protein -0.46
    16 GFF2596 Multidrug resistance transporter, Bcr/CflA family -0.46
    17 GFF6550 4'-phosphopantetheinyl transferase (EC 2.7.8.-) -0.45
    18 GFF231 DNA ligase (ATP) (EC 6.5.1.1) -0.45
    19 GFF418 Endonuclease III (EC 4.2.99.18) -0.45
    20 GFF6822 Peptidase C14, caspase catalytic subunit p20 -0.44

    Or look for positive cofitness