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  • Negative cofitness for GFF1858 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
    SEED: Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF647 Two-component system response regulator QseB -0.53
    2 GFF1834 BUG/TctC family periplasmic protein -0.52
    3 GFF3268 Oxidoreductase, short-chain dehydrogenase/reductase family -0.43
    4 GFF552 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) -0.43
    5 GFF4701 Various polyols ABC transporter, permease protein 2 -0.43
    6 GFF7124 Mobile element protein -0.42
    7 GFF2875 Granule-associated protein -0.42
    8 GFF6279 hypothetical protein -0.42
    9 GFF6569 no description -0.42
    10 GFF7258 Transcriptional regulator, IclR family -0.42
    11 GFF3392 Transcriptional regulator, AraC family -0.42
    12 GFF2217 Transcriptional regulator, LysR family -0.41
    13 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF -0.41
    14 GFF4867 Enoyl-CoA hydratase (EC 4.2.1.17) -0.40
    15 GFF717 Enoyl-CoA hydratase (EC 4.2.1.17) -0.40
    16 GFF6802 Uncharacterized MFS-type transporter -0.39
    17 GFF4541 Uncharacterized protein conserved in bacteria -0.39
    18 GFF6349 no description -0.39
    19 GFF3029 T6SS component TssM (IcmF/VasK) -0.39
    20 GFF246 Transmembrane protein Msl3831 -0.39

    Or look for positive cofitness