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  • Negative cofitness for PS417_09440 from Pseudomonas simiae WCS417

    MerR family transcriptional regulator
    SEED: Redox-sensitive transcriptional activator SoxR
    KEGG: MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_02785 Urease (EC 3.5.1.5) (from data) -0.23
    2 PS417_21050 serine acetyltransferase -0.21
    3 PS417_25885 diguanylate cyclase -0.21
    4 PS417_19145 membrane protein -0.21
    5 PS417_03050 hypothetical protein -0.21
    6 PS417_03065 peptidase A24 -0.20
    7 PS417_09565 DNA polymerase II -0.20
    8 PS417_27505 transcriptional regulator -0.20
    9 PS417_12560 MFS transporter -0.20
    10 PS417_12610 RNA polymerase sigma factor -0.20
    11 PS417_03895 methyltransferase -0.19
    12 PS417_03085 type II secretion system protein F -0.19
    13 PS417_05975 chemotaxis protein CheW -0.19
    14 PS417_03910 pilus assembly protein -0.19
    15 PS417_12530 LysR family transcriptional regulator -0.19
    16 PS417_20955 secretion protein -0.19
    17 PS417_02695 protein hupE -0.19
    18 PS417_17515 GfdT protein -0.18
    19 PS417_01045 RND transporter -0.18
    20 PS417_04315 superoxide dismutase -0.18

    Or look for positive cofitness