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  • Negative cofitness for PS417_09415 from Pseudomonas simiae WCS417

    3-isopropylmalate dehydratase
    SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23950 polynucleotide phosphorylase/polyadenylase -0.24
    2 PS417_00785 hypothetical protein -0.23
    3 PS417_03910 pilus assembly protein -0.22
    4 PS417_03875 membrane protein -0.22
    5 PS417_03070 LuxR family transcriptional regulator -0.22
    6 PS417_25160 hypothetical protein -0.22
    7 PS417_19760 flagellar basal body protein FliL -0.22
    8 PS417_28265 pyridoxamine kinase -0.21
    9 PS417_13425 cupin -0.21
    10 PS417_03540 type III secretion protein -0.20
    11 PS417_15835 universal stress protein -0.20
    12 PS417_04835 hemolysin D -0.20
    13 PS417_10675 TetR family transcriptional regulator -0.20
    14 PS417_03120 histidine kinase -0.19
    15 PS417_02435 flagellar motor protein MotA -0.19
    16 PS417_11885 Inositol transport system sugar-binding protein (from data) -0.19
    17 PS417_20985 porin -0.19
    18 PS417_23785 sulfite oxidase -0.19
    19 PS417_02440 flagellar motor protein MotB -0.19
    20 PS417_18690 aromatic amino acid aminotransferase -0.19

    Or look for positive cofitness