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  • Negative cofitness for GFF1842 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4046 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA -0.58
    2 GFF2656 Acyltransferase 3 -0.56
    3 GFF1259 no description -0.55
    4 GFF4229 Transcriptional regulator -0.55
    5 GFF1903 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching -0.53
    6 GFF1587 no description -0.52
    7 GFF715 hypothetical protein -0.51
    8 GFF5400 Demethylmenaquinone methyltransferase-like protein -0.50
    9 GFF4915 hypothetical protein -0.50
    10 GFF5820 hypothetical protein -0.49
    11 GFF3695 hypothetical protein -0.48
    12 GFF5760 Flagellar transcriptional activator FlhC -0.48
    13 GFF2649 putative autotransporter protein -0.48
    14 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) -0.47
    15 GFF6849 MotA/TolQ/ExbB proton channel family protein -0.47
    16 GFF6548 hypothetical protein -0.47
    17 GFF1580 Mhp operon transcriptional activator -0.47
    18 GFF672 Transcriptional regulator, LysR family -0.47
    19 GFF6016 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) -0.47
    20 GFF3232 Phage lysozyme R (EC 3.2.1.17) -0.46

    Or look for positive cofitness