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  • Negative cofitness for GFF1812 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4927 Citrate-proton symporter -0.57
    2 GFF7280 no description -0.55
    3 GFF5654 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) -0.54
    4 GFF2701 CaiB/BaiF family protein -0.52
    5 GFF2606 Tripartite tricarboxylate transporter TctC family -0.50
    6 GFF6153 Transcriptional activator of acetoin/glycerol metabolism -0.50
    7 GFF4913 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.47
    8 GFF1309 Phosphoglucomutase (EC 5.4.2.2) -0.47
    9 GFF6420 carboxyl-terminal protease -0.47
    10 GFF7165 Adenylate cyclase (EC 4.6.1.1) -0.46
    11 GFF267 no description -0.45
    12 GFF2398 Uncharacterized MFS-type transporter -0.45
    13 GFF6734 Transcriptional regulator, AraC family -0.45
    14 GFF5162 Mg(2+)-transport-ATPase-associated protein MgtC -0.45
    15 GFF6636 Hydrolase, alpha/beta fold family -0.45
    16 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) -0.44
    17 GFF3794 hypothetical protein -0.44
    18 GFF6412 Histidine ABC transporter, permease protein -0.44
    19 GFF5285 Fe2+-dicitrate sensor, membrane component -0.44
    20 GFF1365 no description -0.43

    Or look for positive cofitness