• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF1801 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5709 no description -0.63
    2 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.63
    3 GFF6270 Uncharacterized MFS-type transporter -0.57
    4 GFF6800 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.56
    5 GFF1093 Phosphate ABC transporter, permease protein PstC (TC 3.A.1.7.1) -0.55
    6 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) -0.55
    7 GFF6856 DipZ protein -0.55
    8 GFF2828 Uncharacterized protein CC_3059 -0.54
    9 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain -0.54
    10 GFF723 RNA polymerase ECF-type sigma factor -0.54
    11 GFF452 Chloride channel protein -0.54
    12 GFF6417 BUG/TctC family periplasmic protein -0.53
    13 GFF5015 Putative stomatin/prohibitin-family membrane protease subunit aq_911 -0.53
    14 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) -0.53
    15 GFF3511 no description -0.52
    16 GFF7313 hypothetical protein -0.52
    17 GFF5948 hypothetical protein -0.52
    18 GFF4726 hypothetical protein -0.51
    19 GFF2682 Protein containing domains DUF403 -0.51
    20 GFF4390 Membrane-fusion protein -0.51

    Or look for positive cofitness