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  • Negative cofitness for GFF1790 from Variovorax sp. SCN45

    Hydroxymethylpyrimidine ABC transporter, ATPase component
    SEED: Hydroxymethylpyrimidine ABC transporter, ATPase component
    KEGG: sulfonate/nitrate/taurine transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4321 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.57
    2 GFF1131 putative fatty acid desaturase -0.54
    3 GFF5786 Transcriptional regulator, LuxR family -0.54
    4 GFF5657 Formate dehydrogenase O beta subunit (EC 1.2.1.2) -0.54
    5 GFF2464 Sensory histidine kinase BaeS -0.53
    6 GFF3798 FIG00932573: hypothetical protein -0.53
    7 GFF628 hypothetical protein -0.52
    8 GFF3526 hypothetical protein -0.52
    9 GFF7164 hypothetical protein -0.52
    10 GFF2622 Putative transport protein -0.51
    11 GFF2487 Two-component system sensor histidine kinase/response regulator hybrid -0.51
    12 GFF6805 FIG00821908: hypothetical protein -0.51
    13 GFF4136 hypothetical protein -0.51
    14 GFF840 no description -0.50
    15 GFF5926 FIG00957260: hypothetical protein -0.50
    16 GFF5995 LysR family transcriptional regulator STM3121 -0.50
    17 GFF4003 FIGfam005179 -0.50
    18 GFF681 Hypothetical protein in cluster with At3g50560-like gene family -0.50
    19 GFF6144 2-aminoethylphosphonate ABC transporter substrate-binding protein -0.49
    20 GFF1772 Putative Rieske (2Fe-2S) family oxidoreductase, large subunit -0.49

    Or look for positive cofitness