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  • Negative cofitness for PS417_00900 from Pseudomonas simiae WCS417

    4-aminobutyrate aminotransferase
    SEED: 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
    KEGG: 5-aminovalerate aminotransferase

    Computing cofitness values with 554 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_01505 gamma-aminobutyrate transporter -0.33
    2 PS417_12895 pyruvate dehydrogenase -0.28
    3 PS417_23700 aromatic amino acid transporter -0.25
    4 PS417_19540 hypothetical protein -0.22
    5 PS417_23080 sugar ABC transporter ATPase -0.21
    6 PS417_15210 protein activator of alkane oxidation PraB -0.19
    7 PS417_15875 LuxR family transcriptional regulator -0.19
    8 PS417_25365 trans-aconitate methyltransferase -0.19
    9 PS417_28135 sodium:alanine symporter -0.18
    10 PS417_19180 sugar-binding protein -0.18
    11 PS417_27740 MFS transporter -0.18
    12 PS417_05085 ribosomal subunit interface protein -0.18
    13 PS417_10605 LuxR family transcriptional regulator -0.17
    14 PS417_05305 TonB-dependent receptor -0.17
    15 PS417_23150 Cro/Cl family transcriptional regulator -0.17
    16 PS417_01435 hypothetical protein -0.17
    17 PS417_10175 hypothetical protein -0.17
    18 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) -0.17
    19 PS417_03650 FAD-dependent oxidoreductase -0.16
    20 PS417_22235 aromatic amino acid transporter -0.16

    Or look for positive cofitness