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  • Negative cofitness for GFF178 from Variovorax sp. SCN45

    Mannonate dehydratase (EC 4.2.1.8)
    SEED: Starvation sensing protein RspA
    KEGG: starvation sensing protein RspA

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5668 Uncharacterized MFS-type transporter -0.65
    2 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) -0.64
    3 GFF2433 Putative OMR family iron-siderophore receptor precursor -0.62
    4 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) -0.62
    5 GFF2683 Protein containing domains DUF404, DUF407 -0.61
    6 GFF4784 no description -0.60
    7 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) -0.59
    8 GFF2599 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) -0.59
    9 GFF2296 Putative transmembrane protein -0.59
    10 GFF907 Transcriptional regulator, LysR family -0.59
    11 GFF5410 Adenylate cyclase (EC 4.6.1.1) -0.59
    12 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) -0.59
    13 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily -0.59
    14 GFF4067 FIG00897050: hypothetical protein -0.58
    15 GFF6890 Threonine efflux protein -0.58
    16 GFF2885 Transcriptional regulator, LysR family -0.57
    17 GFF4998 L-carnitine dehydratase/bile acid-inducible protein F -0.57
    18 GFF4682 Transcriptional regulator, MerR family -0.57
    19 GFF131 L-glyceraldehyde 3-phosphate reductase -0.56
    20 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.56

    Or look for positive cofitness