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  • Negative cofitness for GFF1753 from Variovorax sp. SCN45

    LysR family transcriptional regulator lrhA
    SEED: LysR family transcriptional regulator lrhA

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6621 Mobile element protein -0.57
    2 GFF2708 no description -0.57
    3 GFF313 FIG027190: Putative transmembrane protein -0.55
    4 GFF2120 Type IV fimbrial biogenesis protein PilX -0.55
    5 GFF116 RidA/YER057c/UK114 superfamily, group 1 -0.54
    6 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) -0.53
    7 GFF3219 hypothetical protein -0.53
    8 GFF2227 Tricarboxylate transport protein TctC -0.53
    9 GFF1543 Putative SigmaB asociated two-component system sensor protein -0.51
    10 GFF5763 Signal transduction histidine kinase CheA -0.51
    11 GFF6385 Mll4878 protein -0.50
    12 GFF1792 Transcriptional regulator, IclR family -0.50
    13 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.50
    14 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) -0.50
    15 GFF6126 putative membrane protein -0.49
    16 GFF1652 Uncharacterized MFS-type transporter -0.49
    17 GFF7382 hypothetical protein AF1210 -0.48
    18 GFF6410 Histidine utilization repressor -0.48
    19 GFF3494 hypothetical protein -0.48
    20 GFF1494 BUG/TctC family periplasmic protein -0.48

    Or look for positive cofitness