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  • Negative cofitness for PS417_08865 from Pseudomonas simiae WCS417

    large component of pyruvate transporter (actP-like) (from data)
    Original annotation: acetate permease
    SEED: Acetate permease ActP (cation/acetate symporter)
    KEGG: cation/acetate symporter

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06985 metal ABC transporter ATPase -0.29
    2 PS417_04060 dipeptide ABC transporter, permease component (from data) -0.26
    3 PS417_12210 ABC transporter substrate-binding protein -0.23
    4 PS417_19160 hypothetical protein -0.23
    5 PS417_24100 transcriptional regulator PdhR -0.22
    6 PS417_26760 oxidase -0.22
    7 PS417_19350 GTP cyclohydrolase -0.22
    8 PS417_09645 TonB-dependent receptor -0.22
    9 PS417_18710 hypothetical protein -0.22
    10 PS417_02335 multidrug DMT transporter -0.20
    11 PS417_04075 peptide ABC transporter substrate-binding protein -0.20
    12 PS417_13110 methylase -0.20
    13 PS417_04055 peptide transporter -0.20
    14 PS417_04070 porin -0.19
    15 PS417_27870 ATP-dependent DNA helicase RecG -0.19
    16 PS417_21605 MFS transporter -0.19
    17 PS417_09600 glycosyl transferase family 1 -0.19
    18 PS417_19955 hypothetical protein -0.19
    19 PS417_16125 AraC family transcriptional regulator -0.19
    20 PS417_22535 ornithine acetyltransferase -0.18

    Or look for positive cofitness