Negative cofitness for GFF1728 from Variovorax sp. SCN45

D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
KEGG: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6)

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	GFF3589		Transcriptional regulator, LysR family	-0.59
2	GFF3110		Nitrilotriacetate monooxygenase component A (EC 1.14.13.-)	-0.59
3	GFF6397		LysR family transcriptional regulator PA2758	-0.59
4	GFF3999		GMP reductase (EC 1.7.1.7)	-0.58
5	GFF2370		L-carnitine dehydratase/bile acid-inducible protein F	-0.56
6	GFF2045		Peptide chain release factor 3	-0.55
7	GFF1464		hypothetical protein	-0.55
8	GFF1094		Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1)	-0.54
9	GFF2859		Excinuclease ABC subunit C	-0.54
10	GFF4345		hypothetical protein	-0.53
11	GFF769		Conserved TM helix	-0.53
12	GFF1924		Aliphatic sulfonate monooxygenase family, FMNH2- or F420-dependent	-0.53
13	GFF5116		Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD	-0.53
14	GFF2264		Transcriptional regulator, LysR family	-0.53
15	GFF3338		Threonine efflux protein	-0.53
16	GFF3320		3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)	-0.52
17	GFF2006		Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)	-0.52
18	GFF444		Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis	-0.52
19	GFF1012		Cystathionine beta-lyase (EC 4.4.1.8)	-0.51
20	GFF460		Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	-0.50

Or look for positive cofitness