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  • Negative cofitness for GFF1682 from Variovorax sp. SCN45

    3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
    SEED: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6564 hypothetical protein -0.61
    2 GFF4857 benzoate MFS transporter BenK -0.61
    3 GFF5021 Tripartite tricarboxylate transporter TctA family -0.60
    4 GFF6405 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.57
    5 GFF3664 Transcriptional regulator, AraC family -0.57
    6 GFF7292 ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog -0.55
    7 GFF778 Channel-forming transporter/cytolysins activator of TpsB family -0.54
    8 GFF652 bacteriophytochrome heme oxygenase BphO -0.54
    9 GFF4740 no description -0.53
    10 GFF3794 hypothetical protein -0.52
    11 GFF563 Type IV fimbrial biogenesis protein PilY1 -0.52
    12 GFF6049 Acyl-CoA dehydrogenase family protein -0.51
    13 GFF7085 BUG/TctC family periplasmic protein -0.51
    14 GFF5956 FIG01055484: hypothetical protein -0.50
    15 GFF1548 Tripartite tricarboxylate transporter TctA family -0.50
    16 GFF4453 Esterase YqiA -0.50
    17 GFF1083 no description -0.49
    18 GFF5858 heme uptake regulator -0.49
    19 GFF4904 hypothetical protein -0.48
    20 GFF5637 Molybdenum ABC transporter ATP-binding protein ModC -0.48

    Or look for positive cofitness