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  • Negative cofitness for PS417_08540 from Pseudomonas simiae WCS417

    RNA helicase
    SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
    KEGG: ATP-dependent RNA helicase DeaD

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_15695 molybdenum cofactor biosynthesis protein A -0.49
    2 PS417_15715 nitrate reductase -0.46
    3 PS417_26875 histidine kinase -0.43
    4 PS417_28250 cell wall assembly protein -0.43
    5 PS417_15710 nitrate reductase -0.41
    6 PS417_15690 ribonucleoside-triphosphate reductase -0.38
    7 PS417_25970 diguanylate cyclase -0.35
    8 PS417_20165 hypothetical protein -0.35
    9 PS417_15720 nitrate reductase -0.33
    10 PS417_20195 sodium:solute symporter -0.32
    11 PS417_15705 nitrate reductase -0.32
    12 PS417_18400 D-ribose ABC transporter, ATPase component RbsA (from data) -0.31
    13 PS417_22550 ATP-binding protein -0.31
    14 PS417_27655 LysR family transcriptional regulator -0.30
    15 PS417_19180 sugar-binding protein -0.29
    16 PS417_19165 insecticidal toxin complex protein -0.28
    17 PS417_22385 quinolinate synthase A -0.27
    18 PS417_20175 LysR family transcriptional regulator -0.27
    19 PS417_07380 hypothetical protein -0.27
    20 PS417_19540 hypothetical protein -0.27

    Or look for positive cofitness