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  • Negative cofitness for PS417_08525 from Pseudomonas simiae WCS417

    phospho-2-dehydro-3-deoxyheptonate aldolase
    SEED: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II (EC 2.5.1.54)
    KEGG: 3-deoxy-7-phosphoheptulonate synthase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_01305 Fis family transcriptional regulator -0.16
    2 PS417_11345 membrane protein -0.15
    3 PS417_19505 2,4-diaminobutyrate 4-aminotransferase -0.14
    4 PS417_10255 hypothetical protein -0.14
    5 PS417_23380 cytochrome o ubiquinol oxidase subunit III -0.14
    6 PS417_07910 hypothetical protein -0.14
    7 PS417_18835 peptide transporter -0.13
    8 PS417_06350 stationary phase survival protein SurE -0.13
    9 PS417_10025 bacteriophage lambda NinG family protein -0.13
    10 PS417_23150 Cro/Cl family transcriptional regulator -0.13
    11 PS417_17365 galactaro-1,5-lactonase (from data) -0.13
    12 PS417_18215 AraC family transcriptional regulator -0.13
    13 PS417_22875 hypothetical protein -0.13
    14 PS417_07085 transcriptional regulator -0.13
    15 PS417_05445 DNA mismatch repair protein MutT -0.12
    16 PS417_02915 precorrin-3B C17-methyltransferase -0.12
    17 PS417_05470 DSBA oxidoreductase -0.12
    18 PS417_23370 protoheme IX farnesyltransferase -0.12
    19 PS417_25170 FAD-binding protein -0.12
    20 PS417_09890 hypothetical protein -0.12

    Or look for positive cofitness