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  • Negative cofitness for GFF1675 from Variovorax sp. SCN45

    ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) -0.56
    2 GFF4404 Mobile element protein -0.56
    3 GFF6624 hypothetical protein -0.55
    4 GFF5583 Transcriptional regulator PA0181, LysR family -0.53
    5 GFF4810 Ferrichrome-iron receptor -0.49
    6 GFF7322 hypothetical protein -0.49
    7 GFF1771 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.49
    8 GFF3819 hypothetical protein -0.49
    9 GFF5245 FIG00771430: hypothetical protein -0.48
    10 GFF3740 Transcriptional regulator, MerR family -0.48
    11 GFF2021 FIG00538369: hypothetical protein -0.46
    12 GFF2712 no description -0.46
    13 GFF615 beta-glucosidase (EC 3.2.1.21) -0.46
    14 GFF6398 SH3, type 3 -0.46
    15 GFF691 hypothetical protein -0.46
    16 GFF5858 heme uptake regulator -0.45
    17 GFF6169 Na(+) H(+) antiporter subunit F -0.45
    18 GFF6978 no description -0.45
    19 GFF6819 hypothetical protein -0.45
    20 GFF5402 Transcriptional regulator, IclR family -0.45

    Or look for positive cofitness