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  • Negative cofitness for GFF1672 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3686 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) -0.50
    2 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p -0.49
    3 GFF1952 Metallophosphoesterase -0.49
    4 GFF4840 FIG00956188: hypothetical protein -0.49
    5 GFF6840 Putative transmembrane protein -0.48
    6 GFF5776 Gluconokinase (EC 2.7.1.12) -0.48
    7 GFF5463 RidA/YER057c/UK114 superfamily protein -0.47
    8 GFF7171 Transcriptional regulator DmlR, LysR family -0.47
    9 GFF162 hypothetical protein -0.47
    10 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.46
    11 GFF5381 Transcriptional regulator, LysR family -0.46
    12 GFF1107 NAD(FAD)-utilizing dehydrogenases -0.46
    13 GFF2447 beta-lactamase-like protein -0.45
    14 GFF4728 Two-component system sensor histidine kinase -0.45
    15 GFF6224 T6SS component TssK (ImpJ/VasE) -0.45
    16 GFF911 KEGG: transcriptional regulator -0.44
    17 GFF2993 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases -0.44
    18 GFF5361 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases -0.44
    19 GFF797 no description -0.43
    20 GFF7076 no description -0.43

    Or look for positive cofitness