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  • Negative cofitness for GFF1645 from Variovorax sp. SCN45

    Sigma factor PvdS, controling pyoverdin biosynthesis
    SEED: Sigma factor PvdS, controling pyoverdin biosynthesis
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4077 hypothetical protein -0.63
    2 GFF6457 no description -0.58
    3 GFF4868 Type IV secretory pathway, VirD2 components (relaxase) -0.51
    4 GFF6510 Gamma-glutamyltranspeptidase (EC 2.3.2.2) -0.51
    5 GFF848 no description -0.49
    6 GFF1730 Dihydrofolate reductase homolog -0.49
    7 GFF1057 hypothetical protein -0.49
    8 GFF2213 Flp pilus assembly protein, pilin Flp -0.48
    9 GFF5595 no description -0.48
    10 GFF7126 KEGG: transposase -0.48
    11 GFF6301 Pyruvate:Oxaloacetate transcarboxylase domain protein -0.48
    12 GFF5122 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination -0.48
    13 GFF2424 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) -0.48
    14 GFF1321 Probable diguanylate cyclase YeaP -0.48
    15 GFF2083 putative periplasmic membrane protein -0.47
    16 GFF6241 Transglutaminase-like domain -0.47
    17 GFF3199 Ser/Thr protein phosphatase family protein -0.46
    18 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) -0.44
    19 GFF3153 Two-component transcriptional response regulator, LuxR family -0.44
    20 GFF3193 no description -0.43

    Or look for positive cofitness