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  • Negative cofitness for GFF1632 from Variovorax sp. SCN45

    RNA polymerase ECF-type sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4857 benzoate MFS transporter BenK -0.57
    2 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) -0.55
    3 GFF259 Bis-ABC ATPase YheS -0.55
    4 GFF7374 FIG00984748: hypothetical protein -0.55
    5 GFF4202 Enoyl-CoA hydratase (EC 4.2.1.17) -0.53
    6 GFF603 Tricarballylate dehydrogenase, TcuA -0.52
    7 GFF7373 CaiB/BaiF family protein -0.51
    8 GFF7375 Arginine:pyruvate transaminase -0.51
    9 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) -0.50
    10 GFF1965 Magnesium and cobalt efflux protein CorC -0.50
    11 GFF1551 hypothetical protein -0.49
    12 GFF2260 hypothetical protein -0.49
    13 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily -0.48
    14 GFF7162 DNA helicase II related protein -0.48
    15 GFF5755 Flagellar biosynthesis protein FliS -0.48
    16 GFF5797 no description -0.48
    17 GFF1656 hypothetical protein -0.48
    18 GFF6744 hypothetical protein -0.47
    19 GFF4663 no description -0.46
    20 GFF4256 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) -0.46

    Or look for positive cofitness