• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_08230 from Pseudomonas simiae WCS417

    lipopolysaccharide biosynthesis protein RfbH
    SEED: CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-)
    KEGG: CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_11930 hypothetical protein -0.36
    2 PS417_08310 alpha/beta hydrolase -0.36
    3 PS417_28070 phosphate ABC transporter ATP-binding protein -0.33
    4 PS417_26775 thiazole synthase -0.33
    5 PS417_09620 lipopolysaccharide biosynthesis protein -0.33
    6 PS417_21105 aminodeoxychorismate synthase -0.32
    7 PS417_04495 LITAF-like zinc ribbon domain containing protein -0.32
    8 PS417_10645 magnesium ABC transporter ATPase -0.32
    9 PS417_18605 LysR family transcriptional regulator -0.31
    10 PS417_07625 helicase -0.31
    11 PS417_11935 ABC transporter substrate-binding protein -0.31
    12 PS417_02985 diguanylate cyclase -0.31
    13 PS417_25970 diguanylate cyclase -0.30
    14 PS417_27610 hypothetical protein -0.29
    15 PS417_27605 hypothetical protein -0.29
    16 PS417_06770 multidrug transporter -0.29
    17 PS417_24600 hydrogenase -0.29
    18 PS417_25005 molecular chaperone -0.29
    19 PS417_24780 peptidase C13 -0.28
    20 PS417_22405 7-carboxy-7-deazaguanine synthase -0.28

    Or look for positive cofitness