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  • Negative cofitness for PS417_00810 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-E factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24435 shikimate dehydrogenase -0.24
    2 PS417_14595 pyrroline-5-carboxylate reductase -0.22
    3 PS417_16995 LysR family transcriptional regulator -0.20
    4 PS417_14325 AraC family transcriptional regulator -0.19
    5 PS417_22345 acetyl-CoA carboxylase -0.18
    6 PS417_13455 alkaline proteinase inhibitor -0.18
    7 PS417_08635 ammonium transporter -0.18
    8 PS417_02705 urease accessory protein UreF -0.17
    9 PS417_00595 chemotaxis protein -0.17
    10 PS417_09825 hypothetical protein -0.17
    11 PS417_16750 ABC transporter ATP-binding protein -0.17
    12 PS417_27275 hypothetical protein -0.17
    13 PS417_21935 transcriptional regulator -0.17
    14 PS417_08355 glycosylase -0.17
    15 PS417_08830 membrane protein -0.16
    16 PS417_13190 transporter -0.16
    17 PS417_21975 glutamate-pyruvate aminotransferase -0.16
    18 PS417_15340 oxidoreductase -0.16
    19 PS417_20980 uroporphyrin-III methyltransferase -0.16
    20 PS417_17305 hypothetical protein -0.16

    Or look for positive cofitness