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  • Negative cofitness for GFF1604 from Variovorax sp. SCN45

    Prolidase (EC 3.4.13.9)
    SEED: Prolidase (EC 3.4.13.9)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2598 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) -0.63
    2 GFF6980 Mobile element protein -0.58
    3 GFF2285 Transcriptional regulator, RpiR family -0.53
    4 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family -0.52
    5 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD -0.52
    6 GFF6715 Transcriptional regulator of RpiR family in catabolic operon -0.51
    7 GFF1306 no description -0.51
    8 GFF4768 Transcriptional regulator, MarR family -0.51
    9 GFF7319 hypothetical protein -0.50
    10 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) -0.50
    11 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) -0.50
    12 GFF3131 VgrG protein -0.50
    13 GFF3152 hypothetical protein -0.49
    14 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) -0.49
    15 GFF5042 Transcriptional regulator, LysR family -0.49
    16 GFF6211 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.49
    17 GFF3446 Quinone oxidoreductase (EC 1.6.5.5) -0.49
    18 GFF1891 Transcriptional regulator, GntR family -0.48
    19 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX -0.48
    20 GFF1857 FIG00553873: hypothetical protein -0.48

    Or look for positive cofitness