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  • Negative cofitness for GFF1592 from Variovorax sp. SCN45

    Response regulator/GGDEF/EAL domain protein
    SEED: Response regulator/GGDEF/EAL domain protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7177 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B -0.61
    2 GFF2593 Integral membrane protein -0.56
    3 GFF4928 hypothetical protein -0.55
    4 GFF6654 Transcriptional regulator, RpiR family -0.55
    5 GFF5215 Efflux ABC transporter, permease/ATP-binding protein -0.52
    6 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily -0.50
    7 GFF3427 FIG01006093: hypothetical protein -0.49
    8 GFF2492 BUG/TctC family periplasmic protein -0.49
    9 GFF2127 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly -0.49
    10 GFF2363 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) -0.48
    11 GFF7006 Flagellar biosynthesis protein FliR -0.48
    12 GFF2407 hypothetical protein -0.48
    13 GFF1013 hypothetical protein -0.47
    14 GFF1506 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.47
    15 GFF112 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.47
    16 GFF4363 Chromosome initiation inhibitor -0.46
    17 GFF356 L-asparaginase (EC 3.5.1.1) -0.46
    18 GFF1330 UPF0061 protein YdiU -0.46
    19 GFF2584 Sulfate permease -0.46
    20 GFF2180 hypothetical protein -0.46

    Or look for positive cofitness