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  • Negative cofitness for PS417_08070 from Pseudomonas simiae WCS417

    nickel ABC transporter permease
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_13255 ABC transporter -0.25
    2 PS417_14950 structural protein MipA -0.20
    3 PS417_09825 hypothetical protein -0.19
    4 PS417_13040 TetR family transcriptional regulator -0.19
    5 PS417_09680 hydrolase -0.19
    6 PS417_07565 hypothetical protein -0.19
    7 PS417_16945 LuxR family transcriptional regulator -0.18
    8 PS417_14775 major facilitator transporter -0.18
    9 PS417_12795 alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase -0.18
    10 PS417_23420 LuxR family transcriptional regulator -0.17
    11 PS417_00160 2-dehydro-3-deoxy-6-phosphogalactonate aldolase -0.17
    12 PS417_00295 hypothetical protein -0.17
    13 PS417_12760 histidine kinase -0.17
    14 PS417_08770 hypothetical protein -0.17
    15 PS417_05915 spermidine dehydrogenase -0.17
    16 PS417_17740 fatty acid hydroxylase -0.17
    17 PS417_24460 hypothetical protein -0.17
    18 PS417_11245 RNA polymerase subunit sigma-24 -0.17
    19 PS417_15040 DNA-binding protein -0.16
    20 PS417_16255 RNA polymerase sigma factor -0.16

    Or look for positive cofitness