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  • Negative cofitness for PS417_08020 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_14485 malto-oligosyltrehalose trehalohydrolase -0.23
    2 PS417_28405 hypothetical protein -0.22
    3 PS417_28350 fatty acid methyltransferase -0.21
    4 PS417_11995 RNA polymerase sigma factor -0.20
    5 PS417_20785 transcriptional regulator -0.20
    6 PS417_15180 acyl dehydratase -0.20
    7 PS417_11025 sugar ABC transporter substrate-binding protein -0.19
    8 PS417_20960 Nitrate-binding regulatory protein (nasS) (from data) -0.19
    9 PS417_10420 shikimate dehydrogenase -0.19
    10 PS417_24565 hypothetical protein -0.18
    11 PS417_20930 50S rRNA methyltransferase -0.18
    12 PS417_01260 hypothetical protein -0.18
    13 PS417_11235 hypothetical protein -0.18
    14 PS417_11500 hypothetical protein -0.18
    15 PS417_05425 histidine kinase -0.18
    16 PS417_08355 glycosylase -0.18
    17 PS417_08045 uracil permease -0.18
    18 PS417_05100 RNA polymerase sigma factor -0.18
    19 PS417_00370 hypothetical protein -0.17
    20 PS417_03235 xanthine permease XanP -0.17

    Or look for positive cofitness