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  • Negative cofitness for GFF1571 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: probable LysR-family transcriptional regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4595 Transcriptional regulator -0.54
    2 GFF3014 KEGG: type VI secretion system protein ImpF -0.54
    3 GFF5707 Transcriptional regulator, LysR family -0.52
    4 GFF3356 Probable transmembrane protein -0.51
    5 GFF1115 Putative transmembrane protein -0.51
    6 GFF754 FIG00975093: hypothetical protein -0.51
    7 GFF3954 Similar to cobalamin biosynthesis protein CbiB -0.49
    8 GFF5265 Outer membrane lipoprotein -0.47
    9 GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.45
    10 GFF5014 Acyl-CoA dehydrogenase -0.45
    11 GFF690 Transcriptional regulator, IclR family -0.45
    12 GFF5985 dicarboxylic acid transporter PcaT -0.44
    13 GFF6899 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) -0.44
    14 GFF4499 Uncharacterized DUF1427 protein PA2697 -0.44
    15 GFF101 Phosphate-binding DING protein (related to PstS) -0.44
    16 GFF3655 no description -0.44
    17 GFF1475 no description -0.44
    18 GFF1990 Transcriptional regulator, MerR family -0.44
    19 GFF4632 Glycosyl transferase, family 2 -0.43
    20 GFF4174 FIG00919961: hypothetical protein -0.43

    Or look for positive cofitness