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  • Negative cofitness for GFF1552 from Variovorax sp. SCN45

    Phosphate regulon transcriptional regulatory protein PhoB (SphR)
    SEED: Phosphate regulon transcriptional regulatory protein PhoB (SphR)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF543 Uncharacterized deacetylase PA5390 -0.52
    2 GFF1368 BUG/TctC family periplasmic protein -0.51
    3 GFF925 hypothetical protein -0.50
    4 GFF2708 no description -0.49
    5 GFF2024 L-lysine permease -0.48
    6 GFF6175 hypothetical protein -0.47
    7 GFF3414 Fumarylacetoacetase (EC 3.7.1.2) -0.47
    8 GFF5422 putative membrane protein -0.47
    9 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) -0.46
    10 GFF4081 Multicopper oxidase -0.46
    11 GFF1598 no description -0.46
    12 GFF1646 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching -0.45
    13 GFF6460 Sensor protein BasS/PmrB (activates BasR/PmrA) -0.45
    14 GFF1113 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.45
    15 GFF2082 transcriptional regulator, Crp/Fnr family -0.45
    16 GFF791 RNA polymerase sigma factor RpoE -0.45
    17 GFF5965 hypothetical protein -0.45
    18 GFF578 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) -0.45
    19 GFF2200 sigma-54-dependent transcriptional regulator -0.45
    20 GFF7326 Integrase -0.45

    Or look for positive cofitness