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  • Negative cofitness for GFF1539 from Variovorax sp. SCN45

    RsbT co-antagonist protein RsbRA
    SEED: RsbR, positive regulator of sigma-B

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2263 putative membrane protein -0.58
    2 GFF4683 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) -0.58
    3 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) -0.57
    4 GFF5858 heme uptake regulator -0.55
    5 GFF4321 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.53
    6 GFF4240 Integral membrane protein -0.53
    7 GFF507 Hydrolase, alpha/beta fold family -0.53
    8 GFF2504 Cell division protein ZapD -0.53
    9 GFF5190 L-arabinose 1-dehydrogenase (EC 1.1.1.376) -0.50
    10 GFF2464 Sensory histidine kinase BaeS -0.50
    11 GFF7 no description -0.50
    12 GFF306 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase -0.49
    13 GFF681 Hypothetical protein in cluster with At3g50560-like gene family -0.49
    14 GFF5971 hypothetical protein -0.49
    15 GFF916 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) -0.48
    16 GFF7188 Uncharacterized methyltransferase PA1407 -0.48
    17 GFF2346 no description -0.47
    18 GFF2666 Membrane-bound lytic murein transglycosylase B -0.47
    19 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) -0.47
    20 GFF5918 T6SS component TssC (ImpC/VipB) -0.47

    Or look for positive cofitness