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  • Negative cofitness for GFF1536 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1543 Putative SigmaB asociated two-component system sensor protein -0.54
    2 GFF66 hypothetical protein -0.53
    3 GFF1461 Enoyl-CoA hydratase (EC 4.2.1.17) -0.53
    4 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase -0.50
    5 GFF1907 Transcriptional regulator, AraC family -0.49
    6 GFF3511 no description -0.49
    7 GFF2890 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.48
    8 GFF5903 Iron-sulfur cluster regulator IscR -0.48
    9 GFF1793 hypothetical protein -0.48
    10 GFF504 SAM-dependent methyltransferases -0.47
    11 GFF284 putative 2-pyrone-4,6-dicarboxylic acid hydrolase -0.47
    12 GFF767 Alpha-amylase (EC 3.2.1.1) -0.47
    13 GFF3594 no description -0.46
    14 GFF5192 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) -0.46
    15 GFF3458 Rubisco activation protein CbbQ -0.46
    16 GFF6385 Mll4878 protein -0.46
    17 GFF3325 Uncharacterized protein YaeR with similarity to glyoxylase family -0.46
    18 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.45
    19 GFF7215 Transcriptional regulator, LysR family -0.45
    20 GFF808 Polyhydroxyalkanoic acid synthase -0.45

    Or look for positive cofitness