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  • Negative cofitness for GFF1526 from Variovorax sp. SCN45

    putative transmembrane sensor
    SEED: putative transmembrane sensor

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4363 Chromosome initiation inhibitor -0.56
    2 GFF943 Intracellular PHB depolymerase -0.55
    3 GFF3948 Acetyltransferase, GNAT family -0.54
    4 GFF6898 hypothetical protein -0.53
    5 GFF6900 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) -0.53
    6 GFF3493 Transcriptional regulator, LysR family -0.52
    7 GFF2584 Sulfate permease -0.52
    8 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) -0.52
    9 GFF6899 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) -0.51
    10 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase -0.51
    11 GFF1959 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.50
    12 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) -0.50
    13 GFF3813 no description -0.49
    14 GFF2979 Glutathione S-transferase (EC 2.5.1.18) -0.49
    15 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) -0.49
    16 GFF595 Transcriptional regulator, LysR family -0.49
    17 GFF2627 Chorismate synthase (EC 4.2.3.5) -0.49
    18 GFF2453 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1) -0.49
    19 GFF808 Polyhydroxyalkanoic acid synthase -0.49
    20 GFF2953 Transcriptional regulator, AraC family -0.48

    Or look for positive cofitness