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  • Negative cofitness for GFF1518 from Variovorax sp. SCN45

    3-dehydroquinate dehydratase II (EC 4.2.1.10)
    SEED: 3-dehydroquinate dehydratase II (EC 4.2.1.10)
    KEGG: 3-dehydroquinate dehydratase II

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2675 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) -0.54
    2 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily -0.50
    3 GFF5926 FIG00957260: hypothetical protein -0.50
    4 GFF5657 Formate dehydrogenase O beta subunit (EC 1.2.1.2) -0.48
    5 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) -0.48
    6 GFF622 BUG/TctC family periplasmic protein -0.48
    7 GFF4709 putative membrane protein -0.47
    8 GFF3537 Transcriptional regulator, LysR family -0.46
    9 GFF7106 BUG/TctC family periplasmic protein -0.46
    10 GFF5718 Flagellar hook protein FlgE -0.46
    11 GFF3719 Pyrimidine monooxygenase RutA (EC 1.14.99.46) -0.46
    12 GFF4704 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) -0.46
    13 GFF3060 Dihydrodipicolinate synthase family -0.45
    14 GFF3939 Hydrolase, HAD superfamily -0.45
    15 GFF6894 FIG00454405: hypothetical protein -0.45
    16 GFF4659 no description -0.45
    17 GFF4720 Putrescine transport system permease protein potI -0.45
    18 GFF2535 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) -0.45
    19 GFF6473 hypothetical protein -0.44
    20 GFF825 no description -0.44

    Or look for positive cofitness