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  • Negative cofitness for GFF1506 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7217 hypothetical protein -0.59
    2 GFF6537 hypothetical protein -0.59
    3 GFF617 no description -0.50
    4 GFF6152 hypothetical protein -0.50
    5 GFF1086 putative Glutathione-regulated potassium-efflux system protein KefB -0.49
    6 GFF4377 putative plasmid stabilization protein -0.49
    7 GFF3548 hypothetical protein -0.49
    8 GFF3518 no description -0.49
    9 GFF4887 FIG00582580: hypothetical protein -0.49
    10 GFF2872 Cell division protein FtsL -0.49
    11 GFF4181 hypothetical protein -0.48
    12 GFF5671 FIG01964566: Predicted membrane protein, hemolysin III homolog -0.47
    13 GFF3789 hypothetical protein -0.47
    14 GFF1592 Response regulator/GGDEF/EAL domain protein -0.47
    15 GFF4588 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) -0.46
    16 GFF7333 Transcriptional regulator, MerR family -0.46
    17 GFF4137 Methionine ABC transporter substrate-binding protein -0.46
    18 GFF164 DinG family ATP-dependent helicase CPE1197 -0.45
    19 GFF3525 Protein tyrosine/serine phosphatase -0.45
    20 GFF104 General secretion pathway protein D -0.45

    Or look for positive cofitness